Mapped reads for uncultivated Magasanikbacteria bacterium UBA10146 ge... - SRA

SRX3572782: Mapped reads for uncultivated Magasanikbacteria bacterium UBA10146 genome recovered from SRX764704
1 ILLUMINA (Illumina HiSeq 2000) run: 123,819 spots, 30M bases, 14.8Mb downloads

Design: Reads from SRX764704 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA10146 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

show Abstracthide Abstract

Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Magasanikbacteria bacterium UBA10146 genome recovered from SRX764704

SAMN08019348 • SRS2843753 • All experiments • All runs

Organism: Candidatus Magasanikiibacteriota bacterium

Library:

Name: UBA10146_library

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 123,819 spots, 30M bases, 14.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR6482702	123,819	30M	14.8Mb	2018-03-05

ID:: 4958284

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity